Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Chromatiales
Family
Oceanococcaceae
Genus
Abyssibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Chromatiales |
| Family | Oceanococcaceae |
| Genus | Abyssibacter |
| Species | Abyssibacter profundi |
| Strain | OUC007 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689701 bp
Thymine Count
689008 bp
Guanine Count
1184685 bp
Cytosine Count
1177969 bp
Genome Length
3741513 bp
Protein-coding Genes
3309 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | DEH80_16065 | Not Available | Positive | 3507540 - 3508742 | 42086.1 |
| rip metalloprotease rsep | DEH80_16070 | Not Available | Positive | 3508735 - 3510108 | 49146.7 |
| outer membrane protein assembly factor bama | DEH80_16075 | Not Available | Positive | 3510127 - 3512439 | 85806.7 |
| hypothetical protein | DEH80_16080 | Not Available | Positive | 3512493 - 3512996 | 19064.8 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | DEH80_16085 | Not Available | Positive | 3513009 - 3514019 | 34458.1 |
| 3-hydroxyacyl-[acyl-carrier-protein] dehydratase fabz | DEH80_16090 | Not Available | Positive | 3514080 - 3514514 | 16345.1 |
| acyl-[acyl-carrier-protein]--udp-n- acetylglucosamine o-acyltransferase | DEH80_16095 | Not Available | Positive | 3514511 - 3515284 | 28294.5 |
| lipid-a-disaccharide synthase | DEH80_16100 | Not Available | Positive | 3515309 - 3516439 | 40053.0 |
| ribonuclease hii | DEH80_16105 | Not Available | Positive | 3516436 - 3517029 | 20957.3 |
| integron integrase | DEH80_16110 | Not Available | Negative | 3517226 - 3518194 | 36576.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
