Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Chromatiales
Family
Oceanococcaceae
Genus
Abyssibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Chromatiales |
| Family | Oceanococcaceae |
| Genus | Abyssibacter |
| Species | Abyssibacter profundi |
| Strain | OUC007 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689701 bp
Thymine Count
689008 bp
Guanine Count
1184685 bp
Cytosine Count
1177969 bp
Genome Length
3741513 bp
Protein-coding Genes
3309 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sos response-associated peptidase | DEH80_15365 | Not Available | Positive | 3343547 - 3344176 | 23562.6 |
| bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase | DEH80_15370 | Not Available | Positive | 3344516 - 3347290 | 100121.0 |
| hypothetical protein | DEH80_15375 | Not Available | Negative | 3347378 - 3347665 | 10821.8 |
| hypothetical protein | DEH80_15380 | Not Available | Positive | 3347764 - 3348084 | 11061.0 |
| pepsy domain-containing protein | DEH80_15385 | Not Available | Positive | 3348081 - 3349706 | 58347.9 |
| hypothetical protein | DEH80_15390 | Not Available | Positive | 3349703 - 3349963 | 9309.77 |
| rna polymerase subunit sigma | DEH80_15395 | Not Available | Negative | 3350372 - 3350911 | 19977.7 |
| hypothetical protein | DEH80_15400 | Not Available | Positive | 3351040 - 3352269 | 43548.9 |
| 3-methylcrotonyl-coa carboxylase | DEH80_15405 | Not Available | Negative | 3352245 - 3354239 | 70608.7 |
| enoyl-coa hydratase | DEH80_15410 | Not Available | Negative | 3354285 - 3355100 | 28824.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
