Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Chromatiales
Family
Oceanococcaceae
Genus
Abyssibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Chromatiales |
| Family | Oceanococcaceae |
| Genus | Abyssibacter |
| Species | Abyssibacter profundi |
| Strain | OUC007 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689701 bp
Thymine Count
689008 bp
Guanine Count
1184685 bp
Cytosine Count
1177969 bp
Genome Length
3741513 bp
Protein-coding Genes
3309 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sodium-dependent transporter | DEH80_14760 | Not Available | Positive | 3196805 - 3198190 | 49573.0 |
| rnfh family protein | DEH80_14765 | Not Available | Positive | 3198187 - 3198486 | 10515.7 |
| outer membrane protein assembly factor bame | DEH80_14770 | Not Available | Negative | 3198506 - 3198904 | 15007.9 |
| ferric iron uptake transcriptional regulator | DEH80_14775 | Not Available | Positive | 3198939 - 3199358 | 15789.7 |
| dna repair protein recn | DEH80_14780 | Not Available | Negative | 3199386 - 3201071 | 61262.4 |
| nad(+) kinase | DEH80_14785 | Not Available | Negative | 3201071 - 3201937 | 31318.7 |
| heat-inducible transcription repressor hrca | DEH80_14790 | Not Available | Positive | 3202041 - 3203069 | 36700.5 |
| nucleotide exchange factor grpe | DEH80_14795 | Not Available | Positive | 3203144 - 3203731 | 21121.5 |
| molecular chaperone dnak | DEH80_14800 | Not Available | Positive | 3203832 - 3205754 | 68437.6 |
| molecular chaperone dnaj | DEH80_14805 | Not Available | Positive | 3205844 - 3206950 | 39321.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
