Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Chromatiales
Family
Oceanococcaceae
Genus
Abyssibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Chromatiales |
| Family | Oceanococcaceae |
| Genus | Abyssibacter |
| Species | Abyssibacter profundi |
| Strain | OUC007 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689701 bp
Thymine Count
689008 bp
Guanine Count
1184685 bp
Cytosine Count
1177969 bp
Genome Length
3741513 bp
Protein-coding Genes
3309 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dopa 4,5-dioxygenase | DEH80_14460 | Not Available | Negative | 3139895 - 3140242 | 12990.7 |
| quercetin 2,3-dioxygenase | DEH80_14465 | Not Available | Negative | 3140239 - 3140955 | 26138.0 |
| lysr family transcriptional regulator | DEH80_14470 | Not Available | Positive | 3141054 - 3142004 | 34443.4 |
| hypothetical protein | DEH80_14475 | Not Available | Positive | 3141955 - 3142920 | 35290.9 |
| hypothetical protein | DEH80_14480 | Not Available | Positive | 3142892 - 3143308 | 14976.0 |
| hypothetical protein | DEH80_14485 | Not Available | Negative | 3143560 - 3143898 | 13653.1 |
| hypothetical protein | DEH80_14490 | Not Available | Positive | 3144211 - 3144813 | 20592.8 |
| hypothetical protein | DEH80_14495 | Not Available | Positive | 3145000 - 3145530 | 18907.4 |
| flagellar motor switch protein flim | DEH80_14500 | Not Available | Positive | 3145527 - 3146507 | 36717.0 |
| flagellar motor switch protein flin | DEH80_14505 | Not Available | Positive | 3146518 - 3146880 | 12978.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
