Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Chromatiales
Family
Oceanococcaceae
Genus
Abyssibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Chromatiales |
| Family | Oceanococcaceae |
| Genus | Abyssibacter |
| Species | Abyssibacter profundi |
| Strain | OUC007 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689701 bp
Thymine Count
689008 bp
Guanine Count
1184685 bp
Cytosine Count
1177969 bp
Genome Length
3741513 bp
Protein-coding Genes
3309 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shikimate dehydrogenase | DEH80_14110 | Not Available | Positive | 3050032 - 3050868 | 29630.2 |
| cupin domain-containing protein | DEH80_14115 | Not Available | Negative | 3050847 - 3051188 | 12553.8 |
| hypothetical protein | DEH80_14120 | Not Available | Positive | 3051289 - 3053079 | 64928.0 |
| haloalkane dehalogenase | DEH80_14125 | Not Available | Positive | 3053168 - 3054058 | 32642.8 |
| hypothetical protein | DEH80_14130 | Not Available | Positive | 3054188 - 3055183 | 32948.6 |
| hypothetical protein | DEH80_14135 | Not Available | Positive | 3055353 - 3056348 | 33727.6 |
| acyl-coa thioesterase | DEH80_14140 | Not Available | Positive | 3056549 - 3056980 | 16013.1 |
| 2-dehydropantoate 2-reductase | DEH80_14145 | Not Available | Positive | 3056977 - 3058011 | 36586.1 |
| pyruvate kinase | DEH80_14150 | Not Available | Positive | 3058090 - 3059520 | 51340.9 |
| hypothetical protein | DEH80_14155 | Not Available | Negative | 3060015 - 3060512 | 18129.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
