Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Chromatiales
Family
Oceanococcaceae
Genus
Abyssibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Chromatiales |
| Family | Oceanococcaceae |
| Genus | Abyssibacter |
| Species | Abyssibacter profundi |
| Strain | OUC007 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689701 bp
Thymine Count
689008 bp
Guanine Count
1184685 bp
Cytosine Count
1177969 bp
Genome Length
3741513 bp
Protein-coding Genes
3309 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DEH80_13455 | Not Available | Negative | 2902907 - 2904115 | 44398.7 |
| peptide deformylase | DEH80_13460 | Not Available | Positive | 2904139 - 2904645 | 18913.9 |
| methionyl-trna formyltransferase | DEH80_13465 | Not Available | Positive | 2904669 - 2905610 | 33057.7 |
| 16s rrna (cytosine(967)-c(5))-methyltransferase rsmb | DEH80_13470 | Not Available | Positive | 2905600 - 2906865 | 45805.1 |
| trk system potassium transporter trka | DEH80_13475 | Not Available | Positive | 2906999 - 2908372 | 49838.1 |
| potassium transporter | DEH80_13480 | Not Available | Positive | 2908504 - 2909961 | 52918.8 |
| hypothetical protein | DEH80_13485 | Not Available | Positive | 2909958 - 2910284 | 11640.9 |
| homoserine kinase | DEH80_13490 | Not Available | Positive | 2910376 - 2911317 | 35268.5 |
| glutathione s-transferase | DEH80_13495 | Not Available | Positive | 2911336 - 2911938 | 22007.8 |
| tonb-dependent receptor | DEH80_13500 | Not Available | Negative | 2911963 - 2914392 | 89023.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
