Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Chromatiales
Family
Oceanococcaceae
Genus
Abyssibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Chromatiales |
| Family | Oceanococcaceae |
| Genus | Abyssibacter |
| Species | Abyssibacter profundi |
| Strain | OUC007 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689701 bp
Thymine Count
689008 bp
Guanine Count
1184685 bp
Cytosine Count
1177969 bp
Genome Length
3741513 bp
Protein-coding Genes
3309 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione-dependent disulfide-bond oxidoreductase | DEH80_13405 | Not Available | Positive | 2890702 - 2891577 | 32755.6 |
| hypothetical protein | DEH80_13410 | Not Available | Positive | 2891707 - 2891991 | 9816.8 |
| iclr family transcriptional regulator | DEH80_13415 | Not Available | Negative | 2892051 - 2892647 | 21956.5 |
| lysr family transcriptional regulator | DEH80_13420 | Not Available | Negative | 2892623 - 2893573 | 34645.8 |
| hypothetical protein | DEH80_13425 | Not Available | Negative | 2893672 - 2896875 | 110265.0 |
| oxygen-dependent coproporphyrinogen oxidase | DEH80_13430 | Not Available | Negative | 2897067 - 2897984 | 34282.3 |
| trna threonylcarbamoyladenosine biosynthesis protein rimn | DEH80_13435 | Not Available | Negative | 2897981 - 2898529 | 19130.3 |
| dna topoisomerase i | DEH80_13440 | Not Available | Negative | 2898526 - 2900889 | 88498.6 |
| hypothetical protein | DEH80_13445 | Not Available | Negative | 2901141 - 2901614 | 18021.3 |
| dna-protecting protein dpra | DEH80_13450 | Not Available | Negative | 2901786 - 2902835 | 36592.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
