Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Chromatiales
Family
Oceanococcaceae
Genus
Abyssibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Chromatiales |
| Family | Oceanococcaceae |
| Genus | Abyssibacter |
| Species | Abyssibacter profundi |
| Strain | OUC007 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689701 bp
Thymine Count
689008 bp
Guanine Count
1184685 bp
Cytosine Count
1177969 bp
Genome Length
3741513 bp
Protein-coding Genes
3309 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| citrate (si)-synthase | DEH80_13255 | Not Available | Negative | 2847279 - 2848571 | 47659.9 |
| hypothetical protein | DEH80_13260 | Not Available | Negative | 2848796 - 2850121 | 46804.2 |
| malate dehydrogenase | DEH80_13265 | Not Available | Negative | 2850153 - 2851403 | 44119.7 |
| hypothetical protein | DEH80_13270 | Not Available | Negative | 2851554 - 2852564 | 37304.7 |
| cpxcg motif-containing cysteine-rich protein | DEH80_13275 | Not Available | Negative | 2852706 - 2852894 | 6780.83 |
| oxygen-independent coproporphyrinogen iii oxidase-like protein | DEH80_13280 | Not Available | Negative | 2852897 - 2854024 | 40926.4 |
| non-canonical purine ntp pyrophosphatase, rdgb/ham1 family | DEH80_13285 | Not Available | Negative | 2854028 - 2854630 | 21043.1 |
| ribonuclease ph | DEH80_13290 | Not Available | Negative | 2854627 - 2855361 | 26339.2 |
| yicc family protein | DEH80_13295 | Not Available | Positive | 2855423 - 2856286 | 32368.5 |
| cusa/czca family heavy metal efflux rnd transporter | DEH80_13300 | Not Available | Negative | 2857019 - 2860126 | 110573.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
