Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Chromatiales
Family
Oceanococcaceae
Genus
Abyssibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Chromatiales |
| Family | Oceanococcaceae |
| Genus | Abyssibacter |
| Species | Abyssibacter profundi |
| Strain | OUC007 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689701 bp
Thymine Count
689008 bp
Guanine Count
1184685 bp
Cytosine Count
1177969 bp
Genome Length
3741513 bp
Protein-coding Genes
3309 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DEH80_13205 | Not Available | Positive | 2839057 - 2839359 | 10823.1 |
| hypothetical protein | DEH80_13210 | Not Available | Positive | 2839474 - 2840829 | 50708.0 |
| hypothetical protein | DEH80_13215 | Not Available | Negative | 2840857 - 2841609 | 28145.2 |
| heat-shock protein | DEH80_13220 | Not Available | Positive | 2841624 - 2842091 | 16575.1 |
| vwa domain-containing protein | DEH80_13225 | Not Available | Negative | 2842115 - 2843299 | 45781.4 |
| osmc family protein | DEH80_13230 | Not Available | Negative | 2843299 - 2843715 | 14926.1 |
| transcriptional regulator crp | DEH80_13235 | Not Available | Positive | 2843847 - 2844455 | 22643.3 |
| hydroxymethylglutaryl-coa lyase | DEH80_13240 | Not Available | Positive | 2844455 - 2845366 | 31903.4 |
| indole-3-glycerol phosphate synthase trpc | DEH80_13245 | Not Available | Negative | 2845376 - 2846188 | 29034.8 |
| anthranilate phosphoribosyltransferase | DEH80_13250 | Not Available | Negative | 2846193 - 2847212 | 35244.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
