Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Chromatiales
Family
Oceanococcaceae
Genus
Abyssibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Chromatiales |
| Family | Oceanococcaceae |
| Genus | Abyssibacter |
| Species | Abyssibacter profundi |
| Strain | OUC007 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689701 bp
Thymine Count
689008 bp
Guanine Count
1184685 bp
Cytosine Count
1177969 bp
Genome Length
3741513 bp
Protein-coding Genes
3309 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetylornithine deacetylase | DEH80_13000 | Not Available | Negative | 2797835 - 2799001 | 41046.3 |
| hypothetical protein | DEH80_13005 | Not Available | Positive | 2799062 - 2799610 | 19439.4 |
| xaa-pro aminopeptidase | DEH80_13010 | Not Available | Positive | 2799620 - 2800978 | 49184.0 |
| 2-octaprenyl-6-methoxyphenyl hydroxylase | DEH80_13015 | Not Available | Positive | 2801031 - 2802239 | 42770.5 |
| 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase | DEH80_13020 | Not Available | Positive | 2802236 - 2803387 | 40105.8 |
| glycine cleavage system aminomethyltransferase gcvt | DEH80_13025 | Not Available | Positive | 2803710 - 2804804 | 38916.6 |
| glycine cleavage system protein gcvh | DEH80_13030 | Not Available | Positive | 2804868 - 2805257 | 13535.6 |
| aminomethyl-transferring glycine dehydrogenase subunit gcvpa | DEH80_13035 | Not Available | Positive | 2805370 - 2806743 | 48979.8 |
| aminomethyl-transferring glycine dehydrogenase subunit gcvpb | DEH80_13040 | Not Available | Positive | 2806754 - 2808217 | 53260.9 |
| carbohydrate kinase family protein | DEH80_13045 | Not Available | Positive | 2808327 - 2809259 | 33467.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
