Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Chromatiales
Family
Oceanococcaceae
Genus
Abyssibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Chromatiales |
| Family | Oceanococcaceae |
| Genus | Abyssibacter |
| Species | Abyssibacter profundi |
| Strain | OUC007 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689701 bp
Thymine Count
689008 bp
Guanine Count
1184685 bp
Cytosine Count
1177969 bp
Genome Length
3741513 bp
Protein-coding Genes
3309 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-directed rna polymerase subunit beta | DEH80_12650 | Not Available | Positive | 2728387 - 2732529 | 153860.0 |
| dna-directed rna polymerase subunit beta' | DEH80_12655 | Not Available | Positive | 2732660 - 2736886 | 154210.0 |
| 30s ribosomal protein s12 | DEH80_12660 | Not Available | Positive | 2737054 - 2737428 | 13698.7 |
| 30s ribosomal protein s7 | DEH80_12665 | Not Available | Positive | 2737441 - 2737902 | 17411.1 |
| elongation factor g | DEH80_12670 | Not Available | Positive | 2737926 - 2740022 | 77056.2 |
| elongation factor tu | DEH80_12675 | Not Available | Positive | 2740060 - 2741250 | 43092.6 |
| 30s ribosomal protein s10 | DEH80_12680 | Not Available | Positive | 2741365 - 2741679 | 11928.7 |
| 50s ribosomal protein l3 | DEH80_12685 | Not Available | Positive | 2741985 - 2742623 | 22728.4 |
| 50s ribosomal protein l4 | DEH80_12690 | Not Available | Positive | 2742626 - 2743228 | 21477.0 |
| 50s ribosomal protein l23 | DEH80_12695 | Not Available | Positive | 2743225 - 2743521 | 11129.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
