Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Chromatiales
Family
Oceanococcaceae
Genus
Abyssibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Chromatiales |
| Family | Oceanococcaceae |
| Genus | Abyssibacter |
| Species | Abyssibacter profundi |
| Strain | OUC007 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689701 bp
Thymine Count
689008 bp
Guanine Count
1184685 bp
Cytosine Count
1177969 bp
Genome Length
3741513 bp
Protein-coding Genes
3309 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DEH80_00915 | Not Available | Positive | 200727 - 201434 | 25493.5 |
| had family hydrolase | DEH80_00920 | Not Available | Positive | 201427 - 202131 | 25857.7 |
| glutamine cyclotransferase | DEH80_00925 | Not Available | Positive | 202095 - 202928 | 31307.5 |
| cystathionine gamma-synthase | DEH80_00930 | Not Available | Negative | 202925 - 204118 | 42159.3 |
| cystathionine beta-synthase | DEH80_00935 | Not Available | Negative | 204115 - 205482 | 49634.4 |
| rhomboid family intramembrane serine protease | DEH80_00940 | Not Available | Positive | 205656 - 206330 | 24001.1 |
| mfs transporter | DEH80_00945 | Not Available | Positive | 206367 - 207695 | 45970.4 |
| sam-dependent methyltransferase | DEH80_00950 | Not Available | Negative | 207692 - 208303 | 23203.4 |
| hypothetical protein | DEH80_00955 | Not Available | Negative | 208412 - 209110 | 24972.2 |
| rna polymerase subunit sigma | DEH80_00960 | Not Available | Negative | 209107 - 209643 | 20214.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
