Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Chromatiales
Family
Oceanococcaceae
Genus
Abyssibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Chromatiales |
| Family | Oceanococcaceae |
| Genus | Abyssibacter |
| Species | Abyssibacter profundi |
| Strain | OUC007 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689701 bp
Thymine Count
689008 bp
Guanine Count
1184685 bp
Cytosine Count
1177969 bp
Genome Length
3741513 bp
Protein-coding Genes
3309 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DEH80_11740 | Not Available | Negative | 2530788 - 2531594 | 28651.1 |
| hypothetical protein | DEH80_11745 | Not Available | Negative | 2531662 - 2532519 | 30132.2 |
| hypothetical protein | DEH80_11750 | Not Available | Positive | 2532621 - 2534363 | 63489.2 |
| hypothetical protein | DEH80_11755 | Not Available | Negative | 2534382 - 2535458 | 38470.7 |
| hypothetical protein | DEH80_11760 | Not Available | Negative | 2535642 - 2536604 | 34163.8 |
| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | DEH80_11765 | Not Available | Negative | 2536731 - 2538266 | 55770.0 |
| mannuronate-specific alginate lyase | DEH80_11770 | Not Available | Negative | 2538308 - 2539468 | 42625.4 |
| hypothetical protein | DEH80_11775 | Not Available | Negative | 2539480 - 2540916 | 52869.8 |
| alginate o-acetyltransferase | DEH80_11780 | Not Available | Negative | 2540949 - 2541584 | 22655.7 |
| alginate o-acetyltransferase | DEH80_11785 | Not Available | Negative | 2541581 - 2542711 | 42048.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
