Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Chromatiales
Family
Oceanococcaceae
Genus
Abyssibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Chromatiales |
| Family | Oceanococcaceae |
| Genus | Abyssibacter |
| Species | Abyssibacter profundi |
| Strain | OUC007 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689701 bp
Thymine Count
689008 bp
Guanine Count
1184685 bp
Cytosine Count
1177969 bp
Genome Length
3741513 bp
Protein-coding Genes
3309 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| radical sam protein | DEH80_11390 | Not Available | Positive | 2439710 - 2440651 | 34909.6 |
| glycosyl transferase, family 2 | DEH80_11395 | Not Available | Positive | 2440655 - 2441368 | 26946.6 |
| hypothetical protein | DEH80_11400 | Not Available | Positive | 2441435 - 2442658 | 44717.6 |
| phosphoribosylformylglycinamidine synthase | DEH80_11405 | Not Available | Negative | 2442693 - 2446511 | 135608.0 |
| mbl fold metallo-hydrolase | DEH80_11410 | Not Available | Negative | 2446568 - 2447335 | 27249.6 |
| duf1820 domain-containing protein | DEH80_11415 | Not Available | Negative | 2447335 - 2447667 | 12379.7 |
| short-chain dehydrogenase | DEH80_11420 | Not Available | Positive | 2448071 - 2448937 | 30979.4 |
| gnat family n-acetyltransferase | DEH80_11425 | Not Available | Positive | 2448934 - 2449257 | 12082.2 |
| hemerythrin | DEH80_11430 | Not Available | Positive | 2449334 - 2449948 | 22699.5 |
| hypothetical protein | DEH80_11435 | Not Available | Positive | 2450008 - 2450463 | 16500.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
