Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Chromatiales
Family
Oceanococcaceae
Genus
Abyssibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Chromatiales |
| Family | Oceanococcaceae |
| Genus | Abyssibacter |
| Species | Abyssibacter profundi |
| Strain | OUC007 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689701 bp
Thymine Count
689008 bp
Guanine Count
1184685 bp
Cytosine Count
1177969 bp
Genome Length
3741513 bp
Protein-coding Genes
3309 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1329 domain-containing protein | DEH80_11240 | Not Available | Positive | 2410623 - 2412011 | 52314.2 |
| redox-sensitive transcriptional activator soxr | DEH80_11245 | Not Available | Negative | 2412943 - 2413392 | 16478.7 |
| redox-regulated molecular chaperone hsp33 | DEH80_11250 | Not Available | Negative | 2413433 - 2414296 | 31272.3 |
| asp-trna(asn)/glu-trna(gln) amidotransferase gatcab subunit b | DEH80_11255 | Not Available | Negative | 2414316 - 2415752 | 52357.1 |
| hypothetical protein | DEH80_11260 | Not Available | Negative | 2415749 - 2416222 | 16735.9 |
| asp-trna(asn)/glu-trna(gln) amidotransferase gatcab subunit a | DEH80_11265 | Not Available | Negative | 2416225 - 2417682 | 51099.5 |
| asp-trna(asn)/glu-trna(gln) amidotransferase gatcab subunit c | DEH80_11270 | Not Available | Negative | 2417710 - 2417997 | 10820.7 |
| rod shape-determining protein | DEH80_11275 | Not Available | Positive | 2418187 - 2419224 | 37208.3 |
| rod shape-determining protein mrec | DEH80_11280 | Not Available | Positive | 2419310 - 2420323 | 36487.6 |
| rod shape-determining protein mred | DEH80_11285 | Not Available | Positive | 2420221 - 2420808 | 21368.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
