Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Chromatiales
Family
Oceanococcaceae
Genus
Abyssibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Chromatiales |
| Family | Oceanococcaceae |
| Genus | Abyssibacter |
| Species | Abyssibacter profundi |
| Strain | OUC007 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689701 bp
Thymine Count
689008 bp
Guanine Count
1184685 bp
Cytosine Count
1177969 bp
Genome Length
3741513 bp
Protein-coding Genes
3309 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii 3-dehydroquinate dehydratase | DEH80_11090 | Not Available | Positive | 2374703 - 2375158 | 16045.3 |
| acetyl-coa carboxylase biotin carboxyl carrier protein | DEH80_11095 | Not Available | Positive | 2375160 - 2375618 | 16079.2 |
| acetyl-coa carboxylase biotin carboxylase subunit | DEH80_11100 | Not Available | Positive | 2375618 - 2376967 | 48945.0 |
| 50s ribosomal protein l11 methyltransferase | DEH80_11105 | Not Available | Positive | 2376970 - 2377854 | 31089.0 |
| dna-binding transcriptional regulator fis | DEH80_11110 | Not Available | Positive | 2378040 - 2378327 | 10388.3 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase | DEH80_11115 | Not Available | Positive | 2378324 - 2379895 | 55072.2 |
| hypothetical protein | DEH80_11120 | Not Available | Positive | 2380021 - 2380296 | 9772.31 |
| n-acyl-d-glutamate deacylase | DEH80_11125 | Not Available | Negative | 2380325 - 2382265 | 72259.2 |
| long-chain fatty acid--coa ligase | DEH80_11130 | Not Available | Negative | 2382370 - 2384217 | 66528.4 |
| tetr family transcriptional regulator | DEH80_11135 | Not Available | Negative | 2384263 - 2384874 | 23354.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
