Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Chromatiales
Family
Oceanococcaceae
Genus
Abyssibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Chromatiales |
| Family | Oceanococcaceae |
| Genus | Abyssibacter |
| Species | Abyssibacter profundi |
| Strain | OUC007 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689701 bp
Thymine Count
689008 bp
Guanine Count
1184685 bp
Cytosine Count
1177969 bp
Genome Length
3741513 bp
Protein-coding Genes
3309 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv pilus biogenesis/stability protein pilw | DEH80_10990 | Not Available | Negative | 2359342 - 2360109 | 28278.2 |
| 23s rrna (adenine(2503)-c(2))-methyltransferase rlmn | DEH80_10995 | Not Available | Negative | 2360106 - 2361215 | 41218.8 |
| nucleoside-diphosphate kinase | DEH80_11000 | Not Available | Negative | 2361220 - 2361651 | 15572.4 |
| iron-sulfur cluster assembly protein isca | DEH80_11005 | Not Available | Negative | 2361806 - 2362147 | 12180.2 |
| hypothetical protein | DEH80_11010 | Not Available | Negative | 2362144 - 2362557 | 14904.0 |
| iscs subfamily cysteine desulfurase | DEH80_11015 | Not Available | Negative | 2362530 - 2363684 | 40343.3 |
| cysteine desulfurase | DEH80_11020 | Not Available | Negative | 2363681 - 2364838 | 40294.1 |
| fe-s cluster assembly transcriptional regulator iscr | DEH80_11025 | Not Available | Negative | 2364841 - 2365281 | 15541.5 |
| serine o-acetyltransferase | DEH80_11030 | Not Available | Negative | 2365278 - 2366138 | 31237.8 |
| hypothetical protein | DEH80_11035 | Not Available | Positive | 2366137 - 2366442 | 11031.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
