Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Chromatiales
Family
Oceanococcaceae
Genus
Abyssibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Chromatiales |
| Family | Oceanococcaceae |
| Genus | Abyssibacter |
| Species | Abyssibacter profundi |
| Strain | OUC007 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689701 bp
Thymine Count
689008 bp
Guanine Count
1184685 bp
Cytosine Count
1177969 bp
Genome Length
3741513 bp
Protein-coding Genes
3309 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fis family transcriptional regulator | DEH80_10630 | Not Available | Negative | 2288038 - 2288523 | 16677.1 |
| hypothetical protein | DEH80_10635 | Not Available | Negative | 2288520 - 2289551 | 37641.0 |
| hypothetical protein | DEH80_10640 | Not Available | Negative | 2289511 - 2290206 | 24142.2 |
| rna polymerase sigma factor rpoe | DEH80_10645 | Not Available | Negative | 2290216 - 2290788 | 21243.1 |
| l-aspartate oxidase | DEH80_10650 | Not Available | Positive | 2290956 - 2292557 | 58256.6 |
| hypothetical protein | DEH80_10655 | Not Available | Negative | 2292554 - 2293045 | 17970.9 |
| hypothetical protein | DEH80_10660 | Not Available | Negative | 2292948 - 2293199 | 9717.88 |
| succinate dehydrogenase iron-sulfur subunit | DEH80_10665 | Not Available | Negative | 2293237 - 2294025 | 29644.7 |
| succinate dehydrogenase flavoprotein subunit | DEH80_10670 | Not Available | Negative | 2294025 - 2295812 | 65171.3 |
| succinate dehydrogenase, hydrophobic membrane anchor protein | DEH80_10675 | Not Available | Negative | 2295836 - 2296213 | 13633.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
