Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Chromatiales
Family
Oceanococcaceae
Genus
Abyssibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Chromatiales |
| Family | Oceanococcaceae |
| Genus | Abyssibacter |
| Species | Abyssibacter profundi |
| Strain | OUC007 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689701 bp
Thymine Count
689008 bp
Guanine Count
1184685 bp
Cytosine Count
1177969 bp
Genome Length
3741513 bp
Protein-coding Genes
3309 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetraacyldisaccharide 4'-kinase | DEH80_10480 | Not Available | Negative | 2249799 - 2250818 | 37030.7 |
| lipid a export permease/atp-binding protein msba | DEH80_10485 | Not Available | Negative | 2250834 - 2252588 | 64149.0 |
| dna internalization-related competence protein comec/rec2 | DEH80_10490 | Not Available | Negative | 2252637 - 2254931 | 80886.1 |
| lipoprotein-releasing abc transporter atp-binding protein lold | DEH80_10495 | Not Available | Negative | 2254954 - 2255640 | 24265.1 |
| lipoprotein-releasing abc transporter permease subunit | DEH80_10500 | Not Available | Negative | 2255633 - 2256880 | 44705.1 |
| hypothetical protein | DEH80_10505 | Not Available | Positive | 2256957 - 2257289 | 12142.6 |
| agmatine deiminase | DEH80_10510 | Not Available | Positive | 2257363 - 2258391 | 38214.1 |
| acyltransferase | DEH80_10515 | Not Available | Positive | 2258400 - 2259281 | 32170.9 |
| hypothetical protein | DEH80_10520 | Not Available | Negative | 2259351 - 2260997 | 57387.1 |
| transcription-repair coupling factor | DEH80_10525 | Not Available | Positive | 2261143 - 2264604 | 127428.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
