Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Chromatiales
Family
Oceanococcaceae
Genus
Abyssibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Chromatiales |
| Family | Oceanococcaceae |
| Genus | Abyssibacter |
| Species | Abyssibacter profundi |
| Strain | OUC007 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689701 bp
Thymine Count
689008 bp
Guanine Count
1184685 bp
Cytosine Count
1177969 bp
Genome Length
3741513 bp
Protein-coding Genes
3309 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| leucyl/phenylalanyl-trna--protein transferase | DEH80_10380 | Not Available | Positive | 2228794 - 2229540 | 28474.8 |
| arginyltransferase | DEH80_10385 | Not Available | Positive | 2229537 - 2230253 | 27289.7 |
| translation initiation factor if-1 | DEH80_10390 | Not Available | Positive | 2230271 - 2230489 | 8256.99 |
| atp-dependent clp protease atp-binding subunit clpa | DEH80_10395 | Not Available | Negative | 2230542 - 2232815 | 82830.4 |
| atp-dependent clp protease adapter clps | DEH80_10400 | Not Available | Negative | 2232916 - 2233233 | 12042.6 |
| adenylate/guanylate cyclase domain-containing protein | DEH80_10405 | Not Available | Negative | 2233350 - 2235575 | 81723.0 |
| type ii secretion system protein gspc | DEH80_10410 | Not Available | Positive | 2235637 - 2236578 | 33700.9 |
| type ii secretion system protein gspd | DEH80_10415 | Not Available | Positive | 2236580 - 2238739 | 76443.0 |
| type ii secretion system protein gspe | DEH80_10420 | Not Available | Positive | 2238700 - 2240226 | 55841.2 |
| type ii secretion system protein gspf | DEH80_10425 | Not Available | Positive | 2240240 - 2241448 | 44099.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
