Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Chromatiales
Family
Oceanococcaceae
Genus
Abyssibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Chromatiales |
| Family | Oceanococcaceae |
| Genus | Abyssibacter |
| Species | Abyssibacter profundi |
| Strain | OUC007 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689701 bp
Thymine Count
689008 bp
Guanine Count
1184685 bp
Cytosine Count
1177969 bp
Genome Length
3741513 bp
Protein-coding Genes
3309 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hth-type transcriptional regulator cysb | DEH80_10320 | Not Available | Positive | 2217541 - 2218521 | 36311.7 |
| sulfite reductase | DEH80_10325 | Not Available | Positive | 2218598 - 2220244 | 61681.1 |
| oxidoreductase | DEH80_10330 | Not Available | Positive | 2220241 - 2220720 | 17504.4 |
| serine--trna ligase | DEH80_10335 | Not Available | Negative | 2220774 - 2222051 | 46577.4 |
| fluoride efflux transporter crcb | DEH80_10340 | Not Available | Negative | 2222083 - 2222472 | 13519.9 |
| recombination factor protein rara | DEH80_10345 | Not Available | Negative | 2222469 - 2223728 | 44998.7 |
| vanz family protein | DEH80_10350 | Not Available | Negative | 2223725 - 2224054 | 11860.7 |
| outer membrane lipoprotein carrier protein lola | DEH80_10355 | Not Available | Negative | 2224114 - 2224740 | 22489.4 |
| hypothetical protein | DEH80_10370 | Not Available | Positive | 2227293 - 2227622 | 12405.3 |
| gnat family n-acetyltransferase | DEH80_10375 | Not Available | Positive | 2227665 - 2228789 | 42290.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
