Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Chromatiales
Family
Oceanococcaceae
Genus
Abyssibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Chromatiales |
| Family | Oceanococcaceae |
| Genus | Abyssibacter |
| Species | Abyssibacter profundi |
| Strain | OUC007 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689701 bp
Thymine Count
689008 bp
Guanine Count
1184685 bp
Cytosine Count
1177969 bp
Genome Length
3741513 bp
Protein-coding Genes
3309 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ef-p beta-lysylation protein epmb | DEH80_10270 | Not Available | Positive | 2203408 - 2204418 | 36687.0 |
| hypothetical protein | DEH80_10275 | Not Available | Positive | 2204415 - 2206466 | 75600.4 |
| protease htpx | DEH80_10280 | Not Available | Negative | 2206743 - 2207636 | 32001.3 |
| dna topoisomerase iv subunit a | DEH80_10285 | Not Available | Negative | 2207709 - 2209937 | 81318.6 |
| dna topoisomerase iv subunit b | DEH80_10290 | Not Available | Negative | 2209988 - 2211886 | 69086.1 |
| exodeoxyribonuclease vii small subunit | DEH80_10295 | Not Available | Positive | 2212065 - 2212316 | 9114.5 |
| geranyl transferase | DEH80_10300 | Not Available | Positive | 2212313 - 2213209 | 31876.1 |
| 1-deoxy-d-xylulose-5-phosphate synthase | DEH80_10305 | Not Available | Positive | 2213273 - 2215159 | 67587.8 |
| endonuclease | DEH80_10310 | Not Available | Negative | 2215198 - 2216034 | 31272.2 |
| uroporphyrinogen-iii c-methyltransferase | DEH80_10315 | Not Available | Negative | 2216034 - 2217434 | 49640.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
