Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Chromatiales
Family
Oceanococcaceae
Genus
Abyssibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Chromatiales |
| Family | Oceanococcaceae |
| Genus | Abyssibacter |
| Species | Abyssibacter profundi |
| Strain | OUC007 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689701 bp
Thymine Count
689008 bp
Guanine Count
1184685 bp
Cytosine Count
1177969 bp
Genome Length
3741513 bp
Protein-coding Genes
3309 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase response regulator | DEH80_10220 | Not Available | Positive | 2193547 - 2194563 | 36836.6 |
| mfs transporter | DEH80_10225 | Not Available | Negative | 2194642 - 2195859 | 43938.6 |
| chorismate synthase | DEH80_10230 | Not Available | Negative | 2195819 - 2196916 | 39216.6 |
| 50s ribosomal protein l3 n(5)-glutamine methyltransferase | DEH80_10235 | Not Available | Negative | 2197037 - 2197942 | 33063.1 |
| sco family protein | DEH80_10240 | Not Available | Positive | 2197989 - 2198585 | 21668.3 |
| phosphatidylserine decarboxylase | DEH80_10245 | Not Available | Positive | 2198603 - 2199466 | 31320.1 |
| hypothetical protein | DEH80_10250 | Not Available | Positive | 2199463 - 2200329 | 32763.9 |
| hypothetical protein | DEH80_10255 | Not Available | Positive | 2200333 - 2201760 | 49150.0 |
| ef-p lysine aminoacylase genx | DEH80_10260 | Not Available | Negative | 2201803 - 2202729 | 33698.1 |
| elongation factor p | DEH80_10265 | Not Available | Negative | 2202770 - 2203339 | 21183.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
