Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Chromatiales
Family
Oceanococcaceae
Genus
Abyssibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Chromatiales |
| Family | Oceanococcaceae |
| Genus | Abyssibacter |
| Species | Abyssibacter profundi |
| Strain | OUC007 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689701 bp
Thymine Count
689008 bp
Guanine Count
1184685 bp
Cytosine Count
1177969 bp
Genome Length
3741513 bp
Protein-coding Genes
3309 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tryptophan synthase subunit beta | DEH80_10170 | Not Available | Negative | 2181254 - 2182465 | 43072.0 |
| phosphoribosylanthranilate isomerase | DEH80_10175 | Not Available | Negative | 2182443 - 2183072 | 22276.6 |
| trna pseudouridine(38-40) synthase trua | DEH80_10180 | Not Available | Negative | 2183039 - 2183857 | 29782.3 |
| hypothetical protein | DEH80_10185 | Not Available | Negative | 2183857 - 2184534 | 24504.4 |
| hypothetical protein | DEH80_10190 | Not Available | Negative | 2184647 - 2188138 | 121250.0 |
| aspartate-semialdehyde dehydrogenase | DEH80_10195 | Not Available | Negative | 2188313 - 2189338 | 36692.7 |
| 3-isopropylmalate dehydrogenase | DEH80_10200 | Not Available | Negative | 2189364 - 2190437 | 38224.9 |
| 3-isopropylmalate dehydratase small subunit | DEH80_10205 | Not Available | Negative | 2190434 - 2191081 | 24000.3 |
| 3-isopropylmalate dehydratase large subunit | DEH80_10210 | Not Available | Negative | 2191086 - 2192498 | 49768.1 |
| lysr family transcriptional regulator | DEH80_10215 | Not Available | Positive | 2192600 - 2193478 | 31934.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
