Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Chromatiales
Family
Oceanococcaceae
Genus
Abyssibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Chromatiales |
| Family | Oceanococcaceae |
| Genus | Abyssibacter |
| Species | Abyssibacter profundi |
| Strain | OUC007 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689701 bp
Thymine Count
689008 bp
Guanine Count
1184685 bp
Cytosine Count
1177969 bp
Genome Length
3741513 bp
Protein-coding Genes
3309 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase m13 | DEH80_09810 | Not Available | Positive | 2114317 - 2116362 | 76517.6 |
| alpha/beta hydrolase | DEH80_09815 | Not Available | Positive | 2116486 - 2117574 | 40438.9 |
| lamb/ycsf family protein | DEH80_09820 | Not Available | Positive | 2117642 - 2118352 | 24630.3 |
| allophanate hydrolase | DEH80_09825 | Not Available | Positive | 2118349 - 2119104 | 26146.4 |
| allophanate hydrolase | DEH80_09830 | Not Available | Positive | 2119101 - 2120060 | 33673.5 |
| arylesterase | DEH80_09835 | Not Available | Negative | 2120086 - 2120718 | 22731.3 |
| hypothetical protein | DEH80_09840 | Not Available | Negative | 2120721 - 2121230 | 18827.9 |
| dihydrolipoyllysine-residue acetyltransferase | DEH80_09845 | Not Available | Negative | 2121232 - 2122941 | 59190.2 |
| pyruvate dehydrogenase (acetyl-transferring), homodimeric type | DEH80_09850 | Not Available | Negative | 2122938 - 2125598 | 99427.5 |
| alpha-l-fucosidase | DEH80_09855 | Not Available | Positive | 2125679 - 2126722 | 39811.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
