Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Chromatiales
Family
Oceanococcaceae
Genus
Abyssibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Chromatiales |
| Family | Oceanococcaceae |
| Genus | Abyssibacter |
| Species | Abyssibacter profundi |
| Strain | OUC007 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689701 bp
Thymine Count
689008 bp
Guanine Count
1184685 bp
Cytosine Count
1177969 bp
Genome Length
3741513 bp
Protein-coding Genes
3309 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna primase | DEH80_09450 | Not Available | Positive | 2037149 - 2038867 | 63086.8 |
| rna polymerase sigma factor rpod | DEH80_09455 | Not Available | Positive | 2039255 - 2041108 | 70206.0 |
| Trna-met | Not Available | Not Available | Positive | 2041204 - 2041280 | Not Available |
| is3 family transposase | DEH80_09465 | Not Available | Positive | 2041427 - 2042583 | 44047.1 |
| hypothetical protein | DEH80_09470 | Not Available | Positive | 2042771 - 2044576 | 66278.6 |
| hypothetical protein | DEH80_09475 | Not Available | Negative | 2045259 - 2046374 | 41794.4 |
| hypothetical protein | DEH80_09480 | Not Available | Negative | 2046371 - 2048620 | 82408.3 |
| type ii toxin-antitoxin system rele/pare family toxin | DEH80_09490 | Not Available | Negative | 2049290 - 2049604 | 11870.9 |
| type ii toxin-antitoxin system pard family antitoxin | DEH80_09495 | Not Available | Negative | 2049605 - 2049853 | 9233.03 |
| abrb family transcriptional regulator | DEH80_09505 | Not Available | Positive | 2050247 - 2050477 | 8200.01 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
