Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Chromatiales
Family
Oceanococcaceae
Genus
Abyssibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Chromatiales |
| Family | Oceanococcaceae |
| Genus | Abyssibacter |
| Species | Abyssibacter profundi |
| Strain | OUC007 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689701 bp
Thymine Count
689008 bp
Guanine Count
1184685 bp
Cytosine Count
1177969 bp
Genome Length
3741513 bp
Protein-coding Genes
3309 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine--trna ligase subunit beta | DEH80_09400 | Not Available | Positive | 2030287 - 2032326 | 73966.2 |
| d-glycero-beta-d-manno-heptose-1,7-bisphosphate 7-phosphatase | DEH80_09405 | Not Available | Positive | 2032235 - 2032879 | 22788.0 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | DEH80_09410 | Not Available | Negative | 2032901 - 2033398 | 18113.6 |
| dihydroneopterin aldolase | DEH80_09415 | Not Available | Negative | 2033391 - 2033759 | 13896.7 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | DEH80_09420 | Not Available | Negative | 2033750 - 2034760 | 35422.7 |
| 30s ribosomal protein s21 | DEH80_09425 | Not Available | Positive | 2034945 - 2035160 | 8501.44 |
| glutamyl-trna amidotransferase | DEH80_09430 | Not Available | Positive | 2035261 - 2035710 | 16458.9 |
| hypothetical protein | DEH80_09435 | Not Available | Positive | 2035784 - 2035969 | 6301.86 |
| hypothetical protein | DEH80_09440 | Not Available | Positive | 2036044 - 2036568 | 17919.7 |
| glutathione peroxidase | DEH80_09445 | Not Available | Positive | 2036649 - 2037125 | 17554.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
