Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Chromatiales
Family
Oceanococcaceae
Genus
Abyssibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Chromatiales |
| Family | Oceanococcaceae |
| Genus | Abyssibacter |
| Species | Abyssibacter profundi |
| Strain | OUC007 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689701 bp
Thymine Count
689008 bp
Guanine Count
1184685 bp
Cytosine Count
1177969 bp
Genome Length
3741513 bp
Protein-coding Genes
3309 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fatty acid desaturase | DEH80_09350 | Not Available | Positive | 2018348 - 2019457 | 41979.8 |
| hypothetical protein | DEH80_09355 | Not Available | Negative | 2019574 - 2021619 | 72209.4 |
| hypothetical protein | DEH80_09360 | Not Available | Negative | 2021616 - 2022323 | 23851.4 |
| duf4423 domain-containing protein | DEH80_09365 | Not Available | Positive | 2022440 - 2023486 | 38649.9 |
| zip family metal transporter | DEH80_09370 | Not Available | Positive | 2023577 - 2024368 | 26838.3 |
| nitrogen regulation protein nr(i) | DEH80_09375 | Not Available | Negative | 2024391 - 2025896 | 54903.5 |
| pas domain-containing sensor histidine kinase | DEH80_09380 | Not Available | Negative | 2025824 - 2026918 | 40724.2 |
| hypothetical protein | DEH80_09385 | Not Available | Negative | 2027015 - 2027695 | 24970.6 |
| glutamine synthetase | DEH80_09390 | Not Available | Negative | 2027783 - 2029192 | 51752.2 |
| glycine--trna ligase subunit alpha | DEH80_09395 | Not Available | Positive | 2029367 - 2030272 | 34435.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
