Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Chromatiales
Family
Oceanococcaceae
Genus
Abyssibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Chromatiales |
| Family | Oceanococcaceae |
| Genus | Abyssibacter |
| Species | Abyssibacter profundi |
| Strain | OUC007 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689701 bp
Thymine Count
689008 bp
Guanine Count
1184685 bp
Cytosine Count
1177969 bp
Genome Length
3741513 bp
Protein-coding Genes
3309 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase m16 | DEH80_09200 | Not Available | Positive | 1990643 - 1993426 | 101240.0 |
| hypothetical protein | DEH80_09205 | Not Available | Positive | 1993485 - 1993820 | 11399.4 |
| hypothetical protein | DEH80_09210 | Not Available | Negative | 1993834 - 1994127 | 9952.11 |
| hypothetical protein | DEH80_09215 | Not Available | Negative | 1994185 - 1994628 | 15947.2 |
| patatin | DEH80_09220 | Not Available | Positive | 1994735 - 1995514 | 27808.6 |
| hypothetical protein | DEH80_09225 | Not Available | Positive | 1995511 - 1995816 | 11270.1 |
| trna (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-o)- methyltransferase trml | DEH80_09230 | Not Available | Positive | 1995813 - 1996283 | 17440.9 |
| glycerol-3-phosphate dehydrogenase | DEH80_09235 | Not Available | Negative | 1996296 - 1997303 | 35104.2 |
| protein-export chaperone secb | DEH80_09240 | Not Available | Negative | 1997300 - 1997773 | 17410.7 |
| glutaredoxin 3 | DEH80_09245 | Not Available | Negative | 1997827 - 1998087 | 9587.51 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
