Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Chromatiales
Family
Oceanococcaceae
Genus
Abyssibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Chromatiales |
| Family | Oceanococcaceae |
| Genus | Abyssibacter |
| Species | Abyssibacter profundi |
| Strain | OUC007 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689701 bp
Thymine Count
689008 bp
Guanine Count
1184685 bp
Cytosine Count
1177969 bp
Genome Length
3741513 bp
Protein-coding Genes
3309 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ile | Not Available | Not Available | Positive | 1970195 - 1970271 | Not Available |
| tyrosine--trna ligase | DEH80_09100 | Not Available | Negative | 1972549 - 1973757 | 44568.4 |
| peptidase m23 | DEH80_09105 | Not Available | Positive | 1973875 - 1975272 | 50172.7 |
| anhydro-n-acetylmuramic acid kinase | DEH80_09110 | Not Available | Positive | 1975269 - 1976408 | 39473.1 |
| iron-sulfur cluster insertion protein erpa | DEH80_09120 | Not Available | Negative | 1976695 - 1977054 | 12751.8 |
| cell shape determination protein ccma | DEH80_09125 | Not Available | Negative | 1977086 - 1977568 | 16952.0 |
| hypothetical protein | DEH80_09130 | Not Available | Negative | 1977570 - 1978313 | 27565.8 |
| n-acetyl-gamma-glutamyl-phosphate reductase | DEH80_09135 | Not Available | Negative | 1978313 - 1979341 | 35848.1 |
| hypothetical protein | DEH80_09140 | Not Available | Positive | 1979434 - 1981206 | 63534.4 |
| protoporphyrinogen oxidase hemj | DEH80_09145 | Not Available | Positive | 1981306 - 1981728 | 16065.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
