Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Chromatiales
Family
Oceanococcaceae
Genus
Abyssibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Chromatiales |
| Family | Oceanococcaceae |
| Genus | Abyssibacter |
| Species | Abyssibacter profundi |
| Strain | OUC007 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689701 bp
Thymine Count
689008 bp
Guanine Count
1184685 bp
Cytosine Count
1177969 bp
Genome Length
3741513 bp
Protein-coding Genes
3309 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein assembly factor bamd | DEH80_00515 | Not Available | Positive | 108848 - 109819 | 36235.0 |
| nad+ synthase | DEH80_00520 | Not Available | Negative | 109909 - 111546 | 60086.7 |
| succinate--coa ligase subunit alpha | DEH80_00525 | Not Available | Negative | 111582 - 112451 | 29638.7 |
| adp-forming succinate--coa ligase subunit beta | DEH80_00530 | Not Available | Negative | 112478 - 113638 | 40828.1 |
| hypothetical protein | DEH80_00535 | Not Available | Positive | 113714 - 115384 | 59963.9 |
| sigma-54-dependent fis family transcriptional regulator | DEH80_00540 | Not Available | Positive | 115381 - 116718 | 49121.8 |
| hypothetical protein | DEH80_00545 | Not Available | Positive | 116747 - 118387 | 60544.9 |
| protein slyx | DEH80_00550 | Not Available | Positive | 118384 - 118590 | 7896.26 |
| histidine triad nucleotide-binding protein | DEH80_00555 | Not Available | Negative | 118956 - 119300 | 12305.9 |
| gluconolactonase | DEH80_00560 | Not Available | Negative | 119311 - 120390 | 38627.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
