Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Chromatiales
Family
Oceanococcaceae
Genus
Abyssibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Chromatiales |
| Family | Oceanococcaceae |
| Genus | Abyssibacter |
| Species | Abyssibacter profundi |
| Strain | OUC007 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689701 bp
Thymine Count
689008 bp
Guanine Count
1184685 bp
Cytosine Count
1177969 bp
Genome Length
3741513 bp
Protein-coding Genes
3309 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transporter | DEH80_08330 | Not Available | Positive | 1798215 - 1798622 | 14074.4 |
| hypothetical protein | DEH80_08335 | Not Available | Positive | 1798821 - 1799639 | 28756.8 |
| phenylalanine 4-monooxygenase | DEH80_08340 | Not Available | Positive | 1799798 - 1800592 | 30090.1 |
| 4-hydroxyphenylpyruvate dioxygenase | DEH80_08345 | Not Available | Positive | 1800668 - 1801753 | 40196.4 |
| homogentisate 1,2-dioxygenase | DEH80_08350 | Not Available | Positive | 1801760 - 1802908 | 42987.5 |
| 2-keto-4-pentenoate hydratase | DEH80_08355 | Not Available | Positive | 1802942 - 1803958 | 36477.9 |
| maleylacetoacetate isomerase | DEH80_08360 | Not Available | Positive | 1803958 - 1804596 | 23888.5 |
| acetoacetate--coa ligase | DEH80_08365 | Not Available | Positive | 1804593 - 1806518 | 70245.6 |
| Trna-his | Not Available | Not Available | Positive | 1806566 - 1806641 | Not Available |
| Trna-lys | Not Available | Not Available | Positive | 1806648 - 1806723 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
