Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Chromatiales
Family
Oceanococcaceae
Genus
Abyssibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Chromatiales |
| Family | Oceanococcaceae |
| Genus | Abyssibacter |
| Species | Abyssibacter profundi |
| Strain | OUC007 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689701 bp
Thymine Count
689008 bp
Guanine Count
1184685 bp
Cytosine Count
1177969 bp
Genome Length
3741513 bp
Protein-coding Genes
3309 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-methylcitrate dehydratase | DEH80_08280 | Not Available | Negative | 1786522 - 1787973 | 53792.9 |
| 2-methylaconitate cis-trans isomerase prpf | DEH80_08285 | Not Available | Negative | 1788062 - 1789246 | 41075.0 |
| fe/s-dependent 2-methylisocitrate dehydratase acnd | DEH80_08290 | Not Available | Negative | 1789250 - 1791853 | 94950.8 |
| 2-methylcitrate synthase | DEH80_08295 | Not Available | Negative | 1791964 - 1793124 | 42588.8 |
| methylisocitrate lyase | DEH80_08300 | Not Available | Negative | 1793176 - 1794066 | 31502.8 |
| propionate catabolism operon regulatory protein prpr | DEH80_08305 | Not Available | Positive | 1794290 - 1795897 | 56972.4 |
| transcriptional regulator | DEH80_08310 | Not Available | Negative | 1795911 - 1796186 | 10230.2 |
| sulfite exporter taue/safe family protein | DEH80_08315 | Not Available | Positive | 1796253 - 1797092 | 27678.1 |
| zn-dependent hydrolase | DEH80_08320 | Not Available | Positive | 1797089 - 1797793 | 26041.7 |
| hypothetical protein | DEH80_08325 | Not Available | Positive | 1797796 - 1798218 | 14060.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
