Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Chromatiales
Family
Oceanococcaceae
Genus
Abyssibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Chromatiales |
| Family | Oceanococcaceae |
| Genus | Abyssibacter |
| Species | Abyssibacter profundi |
| Strain | OUC007 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689701 bp
Thymine Count
689008 bp
Guanine Count
1184685 bp
Cytosine Count
1177969 bp
Genome Length
3741513 bp
Protein-coding Genes
3309 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| quinolinate synthase | DEH80_07750 | Not Available | Positive | 1682806 - 1683906 | 40415.6 |
| serine hydroxymethyltransferase | DEH80_07755 | Not Available | Positive | 1684025 - 1685317 | 46113.5 |
| transcriptional regulator nrdr | DEH80_07760 | Not Available | Positive | 1685334 - 1685840 | 19225.2 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | DEH80_07765 | Not Available | Positive | 1685892 - 1686986 | 38234.0 |
| riboflavin synthase | DEH80_07770 | Not Available | Positive | 1686971 - 1687579 | 21491.4 |
| 3,4-dihydroxy-2-butanone-4-phosphate synthase | DEH80_07775 | Not Available | Positive | 1687576 - 1688673 | 40289.2 |
| 6,7-dimethyl-8-ribityllumazine synthase | DEH80_07780 | Not Available | Positive | 1688663 - 1689181 | 18444.1 |
| transcription antitermination factor nusb | DEH80_07785 | Not Available | Positive | 1689172 - 1689645 | 17881.4 |
| thiamine-phosphate kinase | DEH80_07790 | Not Available | Positive | 1689348 - 1690589 | 42950.1 |
| phosphatidylglycerophosphatase a | DEH80_07795 | Not Available | Positive | 1690609 - 1691142 | 19684.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
