Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Chromatiales
Family
Oceanococcaceae
Genus
Abyssibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Chromatiales |
| Family | Oceanococcaceae |
| Genus | Abyssibacter |
| Species | Abyssibacter profundi |
| Strain | OUC007 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689701 bp
Thymine Count
689008 bp
Guanine Count
1184685 bp
Cytosine Count
1177969 bp
Genome Length
3741513 bp
Protein-coding Genes
3309 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| addiction module antidote protein, higa family | DEH80_07650 | Not Available | Positive | 1658804 - 1659064 | 9675.66 |
| is3 family transposase | DEH80_07655 | Not Available | Negative | 1659633 - 1659835 | 7673.12 |
| hypothetical protein | DEH80_07660 | Not Available | Negative | 1659868 - 1660134 | 9893.09 |
| udp-glucose 4-epimerase gale | DEH80_07665 | Not Available | Positive | 1660295 - 1661314 | 36773.6 |
| Trna-ala | Not Available | Not Available | Positive | 1661372 - 1661447 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 1661452 - 1661527 | Not Available |
| udp-glucose 6-dehydrogenase | DEH80_07680 | Not Available | Negative | 1661578 - 1662912 | 48539.7 |
| colanic acid biosynthesis glycosyltransferase wcai | DEH80_07685 | Not Available | Negative | 1662943 - 1664220 | 46205.1 |
| nad(p)-dependent oxidoreductase | DEH80_07690 | Not Available | Negative | 1664272 - 1665303 | 37778.5 |
| gdp-fucose synthetase | DEH80_07695 | Not Available | Negative | 1665315 - 1666256 | 34772.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
