Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Chromatiales
Family
Oceanococcaceae
Genus
Abyssibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Chromatiales |
| Family | Oceanococcaceae |
| Genus | Abyssibacter |
| Species | Abyssibacter profundi |
| Strain | OUC007 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689701 bp
Thymine Count
689008 bp
Guanine Count
1184685 bp
Cytosine Count
1177969 bp
Genome Length
3741513 bp
Protein-coding Genes
3309 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system protein f | DEH80_07045 | Not Available | Negative | 1522046 - 1523263 | 44236.7 |
| type iv-a pilus assembly atpase pilb | DEH80_07050 | Not Available | Negative | 1523284 - 1524975 | 61682.3 |
| competence protein comea | DEH80_07055 | Not Available | Positive | 1525239 - 1525490 | 8849.75 |
| hypothetical protein | DEH80_07060 | Not Available | Negative | 1525544 - 1527010 | 53134.0 |
| biosynthetic-type acetolactate synthase large subunit | DEH80_07065 | Not Available | Negative | 1526970 - 1528802 | 66083.8 |
| acetolactate synthase small subunit | DEH80_07070 | Not Available | Positive | 1528944 - 1529450 | 18714.6 |
| ketol-acid reductoisomerase | DEH80_07075 | Not Available | Positive | 1529486 - 1530505 | 36308.3 |
| hypothetical protein | DEH80_07080 | Not Available | Positive | 1530557 - 1531192 | 23088.9 |
| cdp-diacylglycerol--serine o-phosphatidyltransferase | DEH80_07085 | Not Available | Positive | 1531189 - 1531974 | 28218.6 |
| 2-isopropylmalate synthase | DEH80_07090 | Not Available | Positive | 1532329 - 1534017 | 62315.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
