Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Chromatiales
Family
Oceanococcaceae
Genus
Abyssibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Chromatiales |
| Family | Oceanococcaceae |
| Genus | Abyssibacter |
| Species | Abyssibacter profundi |
| Strain | OUC007 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689701 bp
Thymine Count
689008 bp
Guanine Count
1184685 bp
Cytosine Count
1177969 bp
Genome Length
3741513 bp
Protein-coding Genes
3309 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metal-dependent hydrolase | DEH80_06840 | Not Available | Positive | 1480886 - 1481668 | 28647.7 |
| bola family transcriptional regulator | DEH80_06845 | Not Available | Positive | 1481683 - 1481910 | 7947.43 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | DEH80_06850 | Not Available | Positive | 1481923 - 1483179 | 44633.0 |
| atp phosphoribosyltransferase | DEH80_06855 | Not Available | Positive | 1483207 - 1483836 | 22464.6 |
| histidinol dehydrogenase | DEH80_06860 | Not Available | Positive | 1483826 - 1485133 | 46166.4 |
| ubiquinol-cytochrome c reductase iron-sulfur subunit | DEH80_06865 | Not Available | Positive | 1485320 - 1485913 | 20857.0 |
| cytochrome b | DEH80_06870 | Not Available | Positive | 1485916 - 1487160 | 46781.8 |
| cytochrome c1 | DEH80_06875 | Not Available | Positive | 1487162 - 1487926 | 28158.6 |
| stringent starvation protein a | DEH80_06880 | Not Available | Positive | 1487935 - 1488579 | 23772.9 |
| clpxp protease specificity-enhancing factor | DEH80_06885 | Not Available | Positive | 1488624 - 1489019 | 14027.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
