Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Chromatiales
Family
Oceanococcaceae
Genus
Abyssibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Chromatiales |
| Family | Oceanococcaceae |
| Genus | Abyssibacter |
| Species | Abyssibacter profundi |
| Strain | OUC007 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689701 bp
Thymine Count
689008 bp
Guanine Count
1184685 bp
Cytosine Count
1177969 bp
Genome Length
3741513 bp
Protein-coding Genes
3309 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome-associated translation inhibitor raia | DEH80_06790 | Not Available | Negative | 1471885 - 1472211 | 12556.0 |
| rna polymerase factor sigma-54 | DEH80_06795 | Not Available | Negative | 1472269 - 1473687 | 53006.6 |
| lps export abc transporter atp-binding protein | DEH80_06800 | Not Available | Negative | 1473866 - 1474594 | 26454.0 |
| lipopolysaccharide transport periplasmic protein lpta | DEH80_06805 | Not Available | Negative | 1474591 - 1475085 | 17684.9 |
| lps export abc transporter periplasmic protein lptc | DEH80_06810 | Not Available | Negative | 1475078 - 1475662 | 20929.8 |
| 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase | DEH80_06815 | Not Available | Negative | 1475659 - 1476159 | 17860.5 |
| d-arabinose 5-phosphate isomerase | DEH80_06820 | Not Available | Negative | 1476152 - 1477132 | 34426.1 |
| calcium/sodium antiporter | DEH80_06825 | Not Available | Negative | 1477137 - 1478096 | 32304.8 |
| deoxyribodipyrimidine photolyase | DEH80_06830 | Not Available | Negative | 1478445 - 1479878 | 53888.5 |
| abc transporter | DEH80_06835 | Not Available | Positive | 1479958 - 1480872 | 33617.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
