Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Chromatiales
Family
Oceanococcaceae
Genus
Abyssibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Chromatiales |
| Family | Oceanococcaceae |
| Genus | Abyssibacter |
| Species | Abyssibacter profundi |
| Strain | OUC007 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689701 bp
Thymine Count
689008 bp
Guanine Count
1184685 bp
Cytosine Count
1177969 bp
Genome Length
3741513 bp
Protein-coding Genes
3309 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s ribosomal rna | Not Available | Not Available | Positive | 76178 - 79080 | Not Available |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | DEH80_00375 | Not Available | Positive | 76793 - 77539 | 27414.7 |
| mannose-1-phosphate guanylyltransferase | DEH80_00380 | Not Available | Negative | 77528 - 78229 | 25269.4 |
| lps-assembly protein lptd | DEH80_00390 | Not Available | Positive | 78895 - 81441 | 95843.9 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 79620 - 81160 | Not Available |
| hypothetical protein | DEH80_00395 | Not Available | Positive | 81509 - 82834 | 49215.6 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | DEH80_00400 | Not Available | Positive | 82846 - 83829 | 34328.4 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase | DEH80_00405 | Not Available | Positive | 83826 - 84608 | 27896.9 |
| universal stress protein | DEH80_00410 | Not Available | Positive | 84642 - 85082 | 16278.6 |
| hypothetical protein | DEH80_00415 | Not Available | Negative | 85101 - 88130 | 110642.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
