Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Chromatiales
Family
Oceanococcaceae
Genus
Abyssibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Chromatiales |
| Family | Oceanococcaceae |
| Genus | Abyssibacter |
| Species | Abyssibacter profundi |
| Strain | OUC007 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689701 bp
Thymine Count
689008 bp
Guanine Count
1184685 bp
Cytosine Count
1177969 bp
Genome Length
3741513 bp
Protein-coding Genes
3309 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DEH80_06540 | Not Available | Positive | 1424750 - 1424953 | 7285.31 |
| hypothetical protein | DEH80_06545 | Not Available | Positive | 1425037 - 1425351 | 11932.8 |
| hypothetical protein | DEH80_06550 | Not Available | Positive | 1425476 - 1425835 | 12641.5 |
| hypothetical protein | DEH80_06555 | Not Available | Positive | 1425956 - 1426831 | 33393.7 |
| phosphoribosylglycinamide formyltransferase 2 | DEH80_06560 | Not Available | Negative | 1427143 - 1428363 | 43261.0 |
| s-(hydroxymethyl)glutathione dehydrogenase/class iii alcohol dehydrogenase | DEH80_06565 | Not Available | Positive | 1428498 - 1429616 | 39293.3 |
| s-formylglutathione hydrolase | DEH80_06570 | Not Available | Positive | 1429625 - 1430479 | 31354.0 |
| atp-dependent rna helicase | DEH80_06575 | Not Available | Positive | 1430641 - 1432494 | 66452.0 |
| pas domain-containing sensor histidine kinase | DEH80_06580 | Not Available | Negative | 1432557 - 1434194 | 59854.4 |
| udp-2,3-diacylglucosamine hydrolase | DEH80_06585 | Not Available | Positive | 1434193 - 1434999 | 30670.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
