Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Chromatiales
Family
Oceanococcaceae
Genus
Abyssibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Chromatiales |
| Family | Oceanococcaceae |
| Genus | Abyssibacter |
| Species | Abyssibacter profundi |
| Strain | OUC007 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689701 bp
Thymine Count
689008 bp
Guanine Count
1184685 bp
Cytosine Count
1177969 bp
Genome Length
3741513 bp
Protein-coding Genes
3309 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uroporphyrinogen decarboxylase | DEH80_06390 | Not Available | Negative | 1387687 - 1388736 | 38440.1 |
| orotidine-5'-phosphate decarboxylase | DEH80_06395 | Not Available | Negative | 1388773 - 1389498 | 24867.8 |
| glutamate synthase small subunit | DEH80_06400 | Not Available | Negative | 1389526 - 1390938 | 51507.1 |
| glutamate synthase large subunit | DEH80_06405 | Not Available | Negative | 1390998 - 1395458 | 163432.0 |
| deoxyguanosinetriphosphate triphosphohydrolase | DEH80_06410 | Not Available | Negative | 1395660 - 1396805 | 43675.1 |
| 3-dehydroquinate synthase | DEH80_06415 | Not Available | Negative | 1396808 - 1397866 | 37632.6 |
| shikimate kinase arok | DEH80_06420 | Not Available | Negative | 1397863 - 1398405 | 20121.1 |
| hypothetical protein | DEH80_06425 | Not Available | Negative | 1398405 - 1400414 | 69679.8 |
| type iv pilus secretin pilq | DEH80_06430 | Not Available | Negative | 1400495 - 1402558 | 74302.6 |
| hypothetical protein | DEH80_06435 | Not Available | Negative | 1402628 - 1403146 | 19019.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
