Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Chromatiales
Family
Oceanococcaceae
Genus
Abyssibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Chromatiales |
| Family | Oceanococcaceae |
| Genus | Abyssibacter |
| Species | Abyssibacter profundi |
| Strain | OUC007 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689701 bp
Thymine Count
689008 bp
Guanine Count
1184685 bp
Cytosine Count
1177969 bp
Genome Length
3741513 bp
Protein-coding Genes
3309 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DEH80_06140 | Not Available | Negative | 1331324 - 1332313 | 35602.0 |
| abc transporter | DEH80_06145 | Not Available | Negative | 1332310 - 1334160 | 67454.1 |
| abc transporter permease | DEH80_06150 | Not Available | Negative | 1334162 - 1334896 | 26720.3 |
| abc transporter atp-binding protein | DEH80_06155 | Not Available | Negative | 1334896 - 1335810 | 33170.9 |
| short chain dehydrogenase | DEH80_06160 | Not Available | Positive | 1336058 - 1336951 | 31425.9 |
| transcription elongation factor greb | DEH80_06165 | Not Available | Positive | 1336958 - 1337491 | 19682.3 |
| hypothetical protein | DEH80_06170 | Not Available | Positive | 1337534 - 1338034 | 17537.0 |
| radical sam protein | DEH80_06175 | Not Available | Negative | 1338060 - 1339118 | 39999.2 |
| hypothetical protein | DEH80_06180 | Not Available | Positive | 1339653 - 1340306 | 24838.9 |
| 3-deoxy-7-phosphoheptulonate synthase class ii | DEH80_06185 | Not Available | Positive | 1340303 - 1341673 | 50553.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
