Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Chromatiales
Family
Oceanococcaceae
Genus
Abyssibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Chromatiales |
| Family | Oceanococcaceae |
| Genus | Abyssibacter |
| Species | Abyssibacter profundi |
| Strain | OUC007 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689701 bp
Thymine Count
689008 bp
Guanine Count
1184685 bp
Cytosine Count
1177969 bp
Genome Length
3741513 bp
Protein-coding Genes
3309 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | DEH80_06085 | Not Available | Positive | 1319753 - 1320607 | 31859.9 |
| acyl-coa thioesterase ii | DEH80_06090 | Not Available | Positive | 1320649 - 1321524 | 32864.1 |
| formyltetrahydrofolate deformylase | DEH80_06100 | Not Available | Positive | 1321768 - 1322625 | 32469.8 |
| hypothetical protein | DEH80_06105 | Not Available | Negative | 1322622 - 1323047 | 15383.4 |
| cell-cell signaling protein | DEH80_06110 | Not Available | Negative | 1323149 - 1323895 | 26896.1 |
| hypothetical protein | DEH80_06115 | Not Available | Positive | 1323970 - 1324812 | 30687.2 |
| rna polymerase subunit sigma-70 | DEH80_06120 | Not Available | Positive | 1324961 - 1325551 | 22290.4 |
| hypothetical protein | DEH80_06125 | Not Available | Positive | 1325548 - 1326240 | 24983.5 |
| serine protease | DEH80_06130 | Not Available | Positive | 1326237 - 1327541 | 44594.8 |
| hypothetical protein | DEH80_06135 | Not Available | Positive | 1327753 - 1331250 | 111848.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
