Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Chromatiales
Family
Oceanococcaceae
Genus
Abyssibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Chromatiales |
| Family | Oceanococcaceae |
| Genus | Abyssibacter |
| Species | Abyssibacter profundi |
| Strain | OUC007 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689701 bp
Thymine Count
689008 bp
Guanine Count
1184685 bp
Cytosine Count
1177969 bp
Genome Length
3741513 bp
Protein-coding Genes
3309 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c oxidase subunit ii | DEH80_05935 | Not Available | Positive | 1289563 - 1290741 | 42110.4 |
| cytochrome c oxidase subunit i | DEH80_05940 | Not Available | Positive | 1290753 - 1292393 | 60964.4 |
| cytochrome c oxidase assembly protein | DEH80_05945 | Not Available | Positive | 1292583 - 1293065 | 17813.0 |
| cytochrome c oxidase subunit 3 | DEH80_05950 | Not Available | Positive | 1293074 - 1293940 | 32208.3 |
| twin transmembrane helix small protein | DEH80_05955 | Not Available | Negative | 1293970 - 1294215 | 8921.08 |
| hypothetical protein | DEH80_05960 | Not Available | Positive | 1294231 - 1294926 | 25884.2 |
| hypothetical protein | DEH80_05965 | Not Available | Positive | 1294916 - 1295506 | 22306.8 |
| eama family transporter | DEH80_05970 | Not Available | Negative | 1295525 - 1296406 | 31601.8 |
| cytochrome b | DEH80_05975 | Not Available | Positive | 1296593 - 1297585 | 35898.0 |
| protoheme ix farnesyltransferase | DEH80_05980 | Not Available | Positive | 1297591 - 1298496 | 32624.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
