Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Chromatiales
Family
Oceanococcaceae
Genus
Abyssibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Chromatiales |
| Family | Oceanococcaceae |
| Genus | Abyssibacter |
| Species | Abyssibacter profundi |
| Strain | OUC007 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689701 bp
Thymine Count
689008 bp
Guanine Count
1184685 bp
Cytosine Count
1177969 bp
Genome Length
3741513 bp
Protein-coding Genes
3309 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent zinc metalloprotease ftsh | DEH80_05680 | Not Available | Negative | 1228669 - 1230609 | 70115.9 |
| 23s rrna (uridine(2552)-2'-o)-methyltransferase rlme | DEH80_05685 | Not Available | Negative | 1230666 - 1231298 | 23282.7 |
| ribosome assembly rna-binding protein yhby | DEH80_05690 | Not Available | Negative | 1231328 - 1231636 | 11348.7 |
| transcription elongation factor grea | DEH80_05695 | Not Available | Negative | 1231633 - 1232109 | 17247.4 |
| ydiu family protein | DEH80_05700 | Not Available | Negative | 1232249 - 1233814 | 57515.8 |
| metal-dependent hydrolase | DEH80_05705 | Not Available | Negative | 1233933 - 1234817 | 34021.8 |
| hypothetical protein | DEH80_05710 | Not Available | Positive | 1235000 - 1236223 | 44971.8 |
| symporter | DEH80_05715 | Not Available | Negative | 1236199 - 1237113 | 32321.6 |
| hypothetical protein | DEH80_05720 | Not Available | Positive | 1237239 - 1237553 | 12016.7 |
| hypothetical protein | DEH80_05725 | Not Available | Negative | 1237538 - 1240570 | 105558.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
