Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Chromatiales
Family
Oceanococcaceae
Genus
Abyssibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Chromatiales |
| Family | Oceanococcaceae |
| Genus | Abyssibacter |
| Species | Abyssibacter profundi |
| Strain | OUC007 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689701 bp
Thymine Count
689008 bp
Guanine Count
1184685 bp
Cytosine Count
1177969 bp
Genome Length
3741513 bp
Protein-coding Genes
3309 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system protein gspg | DEH80_05580 | Not Available | Negative | 1212069 - 1212515 | 16145.1 |
| rhombosortase | DEH80_05585 | Not Available | Positive | 1212312 - 1213178 | 32237.3 |
| [acyl-carrier-protein] s-malonyltransferase | DEH80_05590 | Not Available | Positive | 1213227 - 1214156 | 32605.2 |
| 3-oxoacyl-acp reductase | DEH80_05595 | Not Available | Positive | 1214171 - 1214929 | 25381.6 |
| acyl carrier protein | DEH80_05600 | Not Available | Positive | 1215044 - 1215289 | 9014.48 |
| beta-ketoacyl-[acyl-carrier-protein] synthase ii | DEH80_05605 | Not Available | Positive | 1215351 - 1216589 | 42459.1 |
| aminodeoxychorismate synthase component i | DEH80_05610 | Not Available | Positive | 1216614 - 1217954 | 48763.0 |
| hypothetical protein | DEH80_05615 | Not Available | Positive | 1217951 - 1218844 | 32074.3 |
| endolytic transglycosylase mltg | DEH80_05620 | Not Available | Positive | 1218841 - 1219848 | 36724.1 |
| dtmp kinase | DEH80_05625 | Not Available | Positive | 1219848 - 1220474 | 23637.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
