Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Chromatiales
Family
Oceanococcaceae
Genus
Abyssibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Chromatiales |
| Family | Oceanococcaceae |
| Genus | Abyssibacter |
| Species | Abyssibacter profundi |
| Strain | OUC007 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689701 bp
Thymine Count
689008 bp
Guanine Count
1184685 bp
Cytosine Count
1177969 bp
Genome Length
3741513 bp
Protein-coding Genes
3309 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aconitate hydratase acna | DEH80_05530 | Not Available | Negative | 1202747 - 1205473 | 98534.5 |
| trna 2-thiouridine(34) synthase mnma | DEH80_05535 | Not Available | Negative | 1205526 - 1206599 | 39223.6 |
| nudix hydrolase | DEH80_05540 | Not Available | Negative | 1206596 - 1207060 | 17351.4 |
| hypothetical protein | DEH80_05545 | Not Available | Negative | 1207057 - 1207809 | 26758.4 |
| hypothetical protein | DEH80_05550 | Not Available | Negative | 1207806 - 1208309 | 18165.9 |
| type ii secretion system protein gspl | DEH80_05555 | Not Available | Negative | 1208306 - 1209508 | 43716.0 |
| general secretion pathway protein gspk | DEH80_05560 | Not Available | Negative | 1209584 - 1210519 | 33768.9 |
| type ii secretion system protein gspj | DEH80_05565 | Not Available | Negative | 1210516 - 1211148 | 23927.8 |
| type ii secretion system protein gspi | DEH80_05570 | Not Available | Negative | 1211145 - 1211501 | 12696.0 |
| type ii secretion system protein gsph | DEH80_05575 | Not Available | Negative | 1211491 - 1212060 | 21045.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
