Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Chromatiales
Family
Oceanococcaceae
Genus
Abyssibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Chromatiales |
| Family | Oceanococcaceae |
| Genus | Abyssibacter |
| Species | Abyssibacter profundi |
| Strain | OUC007 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689701 bp
Thymine Count
689008 bp
Guanine Count
1184685 bp
Cytosine Count
1177969 bp
Genome Length
3741513 bp
Protein-coding Genes
3309 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sam-dependent methyltransferase | DEH80_05230 | Not Available | Positive | 1133588 - 1134355 | 28677.8 |
| ribonuclease hi | DEH80_05235 | Not Available | Positive | 1134376 - 1134828 | 16583.3 |
| dna polymerase iii subunit epsilon | DEH80_05240 | Not Available | Positive | 1134825 - 1135526 | 26239.0 |
| na(+)/h(+) antiporter subunit d | DEH80_05245 | Not Available | Negative | 1135556 - 1137253 | 61035.1 |
| hypothetical protein | DEH80_05250 | Not Available | Negative | 1137243 - 1137536 | 11049.1 |
| cation:proton antiporter | DEH80_05255 | Not Available | Negative | 1137533 - 1138990 | 51391.0 |
| cation:proton antiporter | DEH80_05260 | Not Available | Negative | 1138990 - 1140510 | 52674.6 |
| na+/h+ antiporter subunit c | DEH80_05265 | Not Available | Negative | 1140507 - 1140866 | 13017.3 |
| cation:proton antiporter | DEH80_05270 | Not Available | Negative | 1140863 - 1141294 | 15125.0 |
| cation:proton antiporter | DEH80_05275 | Not Available | Negative | 1141294 - 1141848 | 19667.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
