Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Chromatiales
Family
Oceanococcaceae
Genus
Abyssibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Chromatiales |
| Family | Oceanococcaceae |
| Genus | Abyssibacter |
| Species | Abyssibacter profundi |
| Strain | OUC007 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689701 bp
Thymine Count
689008 bp
Guanine Count
1184685 bp
Cytosine Count
1177969 bp
Genome Length
3741513 bp
Protein-coding Genes
3309 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| smc-scp complex subunit scpb | DEH80_05080 | Not Available | Positive | 1104200 - 1104961 | 27893.6 |
| 23s rrna pseudouridylate synthase b | DEH80_05085 | Not Available | Positive | 1104958 - 1105731 | 28621.6 |
| endonuclease | DEH80_05090 | Not Available | Positive | 1105728 - 1106393 | 24731.8 |
| dna-binding response regulator | DEH80_05095 | Not Available | Negative | 1106360 - 1107061 | 25675.0 |
| hypothetical protein | DEH80_05100 | Not Available | Negative | 1107165 - 1107965 | 28701.4 |
| phosphoglycolate phosphatase | DEH80_05105 | Not Available | Negative | 1107871 - 1108536 | 24106.7 |
| bifunctional 3-demethylubiquinol 3-o-methyltransferase/2-polyprenyl-6-hydroxyphenol methylase | DEH80_05110 | Not Available | Negative | 1108533 - 1109237 | 25727.8 |
| trz/atz family hydrolase | DEH80_05115 | Not Available | Negative | 1109234 - 1110637 | 50208.1 |
| s-methyl-5-thioribose-1-phosphate isomerase | DEH80_05120 | Not Available | Positive | 1110624 - 1111625 | 35203.9 |
| hypothetical protein | DEH80_05125 | Not Available | Negative | 1111626 - 1112378 | 26824.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
