Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Chromatiales
Family
Oceanococcaceae
Genus
Abyssibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Chromatiales |
| Family | Oceanococcaceae |
| Genus | Abyssibacter |
| Species | Abyssibacter profundi |
| Strain | OUC007 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689701 bp
Thymine Count
689008 bp
Guanine Count
1184685 bp
Cytosine Count
1177969 bp
Genome Length
3741513 bp
Protein-coding Genes
3309 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ser | Not Available | Not Available | Positive | 1071131 - 1071220 | Not Available |
| merr family transcriptional regulator | DEH80_04935 | Not Available | Negative | 1071805 - 1072638 | 31091.2 |
| metal-dependent hydrolase | DEH80_04940 | Not Available | Positive | 1072800 - 1073654 | 32579.2 |
| pyridine nucleotide-disulfide oxidoreductase | DEH80_04945 | Not Available | Positive | 1073796 - 1075040 | 44268.5 |
| Trna-met | Not Available | Not Available | Positive | 1075190 - 1075266 | Not Available |
| ribosome maturation factor rimp | DEH80_04955 | Not Available | Positive | 1075615 - 1076082 | 17513.9 |
| transcription termination/antitermination protein nusa | DEH80_04960 | Not Available | Positive | 1076104 - 1077645 | 56050.2 |
| translation initiation factor if-2 | DEH80_04965 | Not Available | Positive | 1077698 - 1080454 | 98223.3 |
| 30s ribosome-binding factor rbfa | DEH80_04970 | Not Available | Positive | 1080478 - 1080843 | 13466.0 |
| trna pseudouridine(55) synthase trub | DEH80_04975 | Not Available | Positive | 1080858 - 1081778 | 32449.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
